#sampleTable Sample Subtype sil_width GENDER KarnScore AgeAtFirstDiagnosis Secondary or Recurrent Survival (days) VITALSTATUS Censured MGMT_methylated % Tumor Nuclei % Necrosis TCGA-02-0001 Classical -0.135526414 FEMALE 80 45 Rec 221 DEAD 0 97.5 0 TCGA-02-0002 Neural -0.069669747 MALE NA NA No NA DEAD 0 97.5 5 TCGA-02-0003 Proneural 0.207223343 MALE 100 50 No 144 DEAD 0 100 12.5 TCGA-02-0004 Mesenchymal 0.343562936 MALE NA 59 No 345 DEAD 0 97.5 7.5 TCGA-02-0006 Mesenchymal 0.170480132 FEMALE 90 56 No 558 DEAD 0 100 7.5 TCGA-02-0007 Proneural 0.01155373 FEMALE 90 42 Rec 187 DEAD 0 100 7.5 TCGA-02-0009 Classical 0.262354644 FEMALE 90 61 No 322 DEAD 0 100 5 TCGA-02-0010 Proneural 0.421156343 FEMALE 80 22 Sec 493 DEAD 0 100 5 TCGA-02-0011 Proneural 0.276830393 FEMALE 90 19 No 630 DEAD 0 100 2.5 TCGA-02-0014 Proneural 0.4144512 MALE 100 26 No 2512 DEAD 0 100 2.5 TCGA-02-0015 Classical -0.066561833 MALE NA 50 No 627 DEAD 0 100 15 TCGA-02-0016 Classical 0.071235193 MALE NA 50 No 859 DEAD 0 Methylated 87.5 0 TCGA-02-0021 Classical 0.276330293 FEMALE 90 45 Rec 2104 DEAD 0 100 7.5 TCGA-02-0023 Classical 0.079292594 FEMALE NA 38 No 612 DEAD 0 100 2.5 TCGA-02-0024 Proneural 0.374207219 MALE 100 40 Rec 214 DEAD 0 87.5 7.5 TCGA-02-0025 Mesenchymal 0.385248047 MALE NA 48 No 1300 DEAD 0 100 20 TCGA-02-0026 Proneural 0.366177964 MALE NA 27 No 748 DEAD 0 100 22.5 TCGA-02-0027 Classical 0.027240031 FEMALE 100 34 No 370 DEAD 0 100 12.5 TCGA-02-0028 Proneural 0.221351107 MALE 100 46 Sec 74 DEAD 0 Methylated 100 20 TCGA-02-0033 Mesenchymal 0.435883167 MALE 100 55 No 86 DEAD 0 100 15 TCGA-02-0034 Mesenchymal 0.375636901 MALE 80 61 No 430 DEAD 0 100 15 TCGA-02-0037 Classical -0.036040059 FEMALE 90 74 No 110 DEAD 0 100 17.5 TCGA-02-0038 Classical 0.023632439 FEMALE 80 49 No 326 DEAD 0 100 12.5 TCGA-02-0039 Mesenchymal 0.193550485 MALE NA 54 No 583 DEAD 0 100 12.5 TCGA-02-0043 Classical 0.17831233 FEMALE 90 56 Rec 125 DEAD 0 Methylated 100 20 TCGA-02-0046 Proneural 0.238203419 MALE 70 61 No 209 DEAD 0 100 10 TCGA-02-0047 Proneural 0.128054411 MALE 90 79 No 448 DEAD 0 92.5 5 TCGA-02-0048 Proneural 0.145138572 MALE NA 80 No 98 DEAD 0 100 5 TCGA-02-0051 Mesenchymal 0.333325009 MALE NA 45 No 46 DEAD 0 100 20 TCGA-02-0052 Neural -0.040029613 MALE 90 49 No 383 DEAD 0 100 12.5 TCGA-02-0054 Mesenchymal 0.063750538 FEMALE 90 44 No 199 DEAD 0 Methylated 95 2.5 TCGA-02-0055 Mesenchymal 0.418365191 FEMALE 90 62 No 76 DEAD 0 95 15 TCGA-02-0057 Neural 0.012480395 FEMALE 90 67 Rec 131 DEAD 0 100 12.5 TCGA-02-0058 Proneural -0.123252152 FEMALE 90 29 Rec 82 DEAD 0 Methylated 97.5 0 TCGA-02-0059 Mesenchymal 0.422077223 MALE NA 69 No 291 DEAD 0 100 22.5 TCGA-02-0060 Proneural 0.109344037 FEMALE 80 66 No 183 DEAD 0 92.5 17.5 TCGA-02-0064 Mesenchymal 0.368693722 MALE 100 49 No 600 DEAD 0 Methylated 100 2.5 TCGA-02-0068 Classical -0.02076099 MALE NA 57 No 602 DEAD 0 97.5 12.5 TCGA-02-0069 Proneural 0.347024096 FEMALE NA 31 No 1261 DEAD 0 Methylated 97.5 0 TCGA-02-0070 Classical 0.053903275 MALE NA 71 No 498 DEAD 0 100 2.5 TCGA-02-0071 Classical -0.035006428 MALE NA 53 No 167 DEAD 0 100 10 TCGA-02-0074 Proneural 0.363031477 FEMALE 90 68 No 310 DEAD 0 100 12.5 TCGA-02-0075 Mesenchymal 0.282679685 MALE NA 64 No 635 DEAD 0 100 7.5 TCGA-02-0079 Mesenchymal 0.259610167 MALE NA 56 No 748 DEAD 0 92.5 0 TCGA-02-0080 Proneural 0.215391741 MALE 90 35 Rec 362 DEAD 0 100 13.5 TCGA-02-0083 Neural -0.03796757 FEMALE 90 60 Rec 277 DEAD 0 Methylated 100 20 TCGA-02-0084 Proneural 0.006015761 FEMALE NA 34 No 1115 DEAD 0 100 2.5 TCGA-02-0085 Mesenchymal 0.01688474 FEMALE NA 66 No 1325 DEAD 0 Methylated 92.5 0 TCGA-02-0086 Mesenchymal 0.254711485 FEMALE 100 46 No 268 DEAD 0 100 20 TCGA-02-0087 Proneural 0.134315757 FEMALE NA 28 No 1022 DEAD 0 100 0 TCGA-02-0089 Neural 0.041700849 MALE 100 54 Rec 142 DEAD 0 100 10 TCGA-02-0099 Mesenchymal 0.144296922 MALE 80 47 Rec 103 DEAD 0 Methylated 97.5 7.5 TCGA-02-0102 Classical 0.173196439 MALE 100 44 Sec 372 DEAD 0 97.5 15 TCGA-02-0104 Proneural 0.265926124 FEMALE NA 33 No 520 DEAD 0 100 5 TCGA-02-0106 Mesenchymal 0.203177872 MALE NA 55 No 159 DEAD 0 100 7.5 TCGA-02-0107 Mesenchymal 0.323437252 MALE 90 57 Rec 211 DEAD 0 92.5 10 TCGA-02-0111 Mesenchymal 0.380238924 MALE NA 57 No 705 DEAD 0 Methylated 90 17.5 #sampleMapping TRIBE_p_TCGAaffx_B1_2_GBM_Nsp_GenomeWideSNP_6_A01_155716 TCGA-02-0001 TRIBE_p_TCGAaffx_B1_2_GBM_Nsp_GenomeWideSNP_6_A03_155748 TCGA-02-0002 TRIBE_p_TCGAaffx_B1_2_GBM_Nsp_GenomeWideSNP_6_A05_155780 TCGA-02-0003 SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A03_228722 TCGA-02-0004 TRIBE_p_TCGAaffx_B1_2_GBM_Nsp_GenomeWideSNP_6_A07_155812 TCGA-02-0006 TRIBE_p_TCGAaffx_B1_2_GBM_Nsp_GenomeWideSNP_6_A09_155844 TCGA-02-0007 TRIBE_p_TCGAaffx_B1_2_GBM_Nsp_GenomeWideSNP_6_A11_155876 TCGA-02-0009 TRIBE_p_TCGAaffx_B1_2_GBM_Nsp_GenomeWideSNP_6_B03_155750_2 TCGA-02-0010 TRIBE_p_TCGAaffx_B1_2_GBM_Nsp_GenomeWideSNP_6_B05_155782 TCGA-02-0011 TRIBE_p_TCGAaffx_B1_2_GBM_Nsp_GenomeWideSNP_6_B07_155814 TCGA-02-0014 SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A06_228770 TCGA-02-0015 SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A08_228802 TCGA-02-0016 TRIBE_p_TCGAaffx_B1_2_GBM_Nsp_GenomeWideSNP_6_B09_155846 TCGA-02-0021 SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A10_228834 TCGA-02-0023 TRIBE_p_TCGAaffx_B1_2_GBM_Nsp_GenomeWideSNP_6_B11_155878 TCGA-02-0024 SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_A12_228866 TCGA-02-0025 SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B02_228708 TCGA-02-0026 TRIBE_p_TCGAaffx_B1_2_GBM_Nsp_GenomeWideSNP_6_C01_155720 TCGA-02-0027 TRIBE_p_TCGAaffx_B1_2_GBM_Nsp_GenomeWideSNP_6_C03_155752 TCGA-02-0028 TRIBE_p_TCGAaffx_B1_2_GBM_Nsp_GenomeWideSNP_6_C05_155784 TCGA-02-0033 STAIR_p_TCGA_Batch7_Affx_N_GenomeWideSNP_6_F12_238496 TCGA-02-0034 TRIBE_p_TCGAaffx_B1_2_GBM_Nsp_GenomeWideSNP_6_C09_155848 TCGA-02-0037 TRIBE_p_TCGAaffx_B1_2_GBM_Nsp_GenomeWideSNP_6_C11_155880 TCGA-02-0038 SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B04_228740 TCGA-02-0039 TRIBE_p_TCGAaffx_B1_2_GBM_Nsp_GenomeWideSNP_6_D03_155754 TCGA-02-0043 TRIBE_p_TCGAaffx_B1_2_GBM_Nsp_GenomeWideSNP_6_D05_155786 TCGA-02-0046 TRIBE_p_TCGAaffx_B1_2_GBM_Nsp_GenomeWideSNP_6_D07_155818 TCGA-02-0047 SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B05_228756 TCGA-02-0048 SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B07_228788 TCGA-02-0051 TRIBE_p_TCGAaffx_B1_2_GBM_Nsp_GenomeWideSNP_6_D09_155850 TCGA-02-0052 TRIBE_p_TCGAaffx_B1_2_GBM_Nsp_GenomeWideSNP_6_D11_155882 TCGA-02-0054 TRIBE_p_TCGAaffx_B1_2_GBM_Nsp_GenomeWideSNP_6_E01_155724 TCGA-02-0055 TRIBE_p_TCGAaffx_B1_2_GBM_Nsp_GenomeWideSNP_6_E03_155756 TCGA-02-0057 TRIBE_p_TCGAaffx_B1_2_GBM_Nsp_GenomeWideSNP_6_E07_155820 TCGA-02-0058 SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B10_228836 TCGA-02-0059 STAIR_p_TCGA_Batch7_Affx_N_GenomeWideSNP_6_G01_238498 TCGA-02-0060 TRIBE_p_TCGAaffx_B1_2_GBM_Nsp_GenomeWideSNP_6_G07_155824 TCGA-02-0064 SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_B12_228868 TCGA-02-0068 TRIBE_p_TCGAaffx_B1_2_GBM_Nsp_GenomeWideSNP_6_E11_155884 TCGA-02-0069 SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C03_228726 TCGA-02-0070 TRIBE_p_TCGAaffx_B1_2_GBM_Nsp_GenomeWideSNP_6_F01_155726 TCGA-02-0071 TRIBE_p_TCGAaffx_B1_2_GBM_Nsp_GenomeWideSNP_6_F03_155758 TCGA-02-0074 TRIBE_p_TCGAaffx_B1_2_GBM_Nsp_GenomeWideSNP_6_F09_155854 TCGA-02-0075 STAIR_p_TCGA_Batch7_Affx_N_GenomeWideSNP_6_B03_238382 TCGA-02-0079 TRIBE_p_TCGAaffx_B1_2_GBM_Nsp_GenomeWideSNP_6_F07_155822 TCGA-02-0080 TRIBE_p_TCGAaffx_B1_2_GBM_Nsp_GenomeWideSNP_6_G03_155760 TCGA-02-0083 STAIR_p_TCGA_Batch7_Affx_N_GenomeWideSNP_6_C01_238402 TCGA-02-0084 TRIBE_p_TCGAaffx_B1_2_GBM_Nsp_GenomeWideSNP_6_G01_155728 TCGA-02-0085 TRIBE_p_TCGAaffx_B1_2_GBM_Nsp_GenomeWideSNP_6_H01_155730 TCGA-02-0086 TRIBE_p_TCGAaffx_B1_2_GBM_Nsp_GenomeWideSNP_6_H05_155794 TCGA-02-0089 TRIBE_p_TCGAaffx_B1_2_GBM_Nsp_GenomeWideSNP_6_F11_155886 TCGA-02-0099 TRIBE_p_TCGAaffx_B1_2_GBM_Nsp_GenomeWideSNP_6_G05_155792 TCGA-02-0102 SHUNT_p_TCGA_sigwga_Affx_Sty_GenomeWideSNP_6_C05_228758 TCGA-02-0104 TRIGS_p_TCGAaffxB5_sty_GenomeWideSNP_6_B07_223184 TCGA-02-0106 TRIBE_p_TCGAaffx_B1_2_GBM_Nsp_GenomeWideSNP_6_F05_155790 TCGA-02-0107 TRIGS_p_TCGAaffxB5_sty_GenomeWideSNP_6_C04_223138 TCGA-02-0111 #colors * Classical 80,180,80 * Neural 10,150,220 * Proneural 110,35,180 * Mesenchymal 50,75,120 GENDER MALE 0,0,155 GENDER FEMALE 70,150,70 Secondary or Recurrent NO 0,0,100 Secondary or Recurrent REC 200,0,0 Secondary or Recurrent Sec 230,150,25 Secondary or Recurrent NA 150,150,150 sil_width -0.1:0.5 0,0,255 255,0,0 KarnScore * 0,0,255 AgeAtFirstDiagnosis * 0,0,255 Survival (days) * 0,0,255 MGMT_methylated Methylated 200,0,0 % Tumor Nuclei 80:100 0,0,255 % Necrosis * 0,0,255