# Hosted genomes list. Tab delimited file with 3 columns Name (for menu), url to .genome or .json file, and genome ID. A. thaliana (TAIR 10) https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/tair10.json tair10 C. elegans (ce11) https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/ce11.json ce11 Chicken (GRCg6a / galGal6) https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/galGal6.json galGal6 Gallus gallus (GCF_016699485.2) https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/GCF_016699485.2.json GCF_016699485.2 Chimp (panTro4) https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/panTro4.json panTro4 Coprinopsis cinerea okayama7#130 (GCA_000182895.1) https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/GCA_000182895.1_dt.json GCA_000182895.1 Cow (bosTau8) https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/bosTau8.json bosTau8 Cow (bosTau9) https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/bosTau9.json bosTau9 D. melanogaster (dm6) https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/dm6.json dm6 D. melanogaster (dm3) https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/dm3.json dm3 D. melanogaster (r5.9) https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/dmel_r5.9.json dmel_r5.9 Dog (canFam3) https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/canFam3.json canFam3 Dog (UU_Cfam_GSD_1.0/canFam4) https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/canFam4.json canFam4 Dog (canFam5) https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/canFam5.json canFam5 Human (1kg, b37+decoy) https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/b37_1kg.json 1kg_v37 Human (T2T CHM13-v2.0/hs1) https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/hs1.json hs1 Human (T2T CHM13-v1.1) https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/chm13v1.1.json chm13v1.1 Human (hg18) https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/hg18.json hg18 Human (hg19) https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/hg19.json hg19 Human (hg38) https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/hg38.json hg38 Human (hg38 1kg/GATK) https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/hg38_1kg.json hg38_1kg Macaca fascicularis 6.0 (GCA_011100615.1) https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/GCA_011100615.1.json GCA_011100615.1 Mouse mm10 https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/mm10.json mm10 Mouse mm9 https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/mm9.json mm9 Mouse mm39 https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/mm39.json mm39 Rat (rn6) https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/rn6.json rn6 Rat (rn7) https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/rn7.json rn7 S. cerevisiae (sacCer3) https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/sacCer3.json sacCer3 Zebrafish (GRCz10/danRer10) https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/danRer10.json danRer10 Zebrafish (GRCz11/danRer11) https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/danRer11.json danRer11 SARS-CoV-2 https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/ASM985889v3.json ASM985889v3 S. pombe (ASM294v2) https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/ASM294v2.json ASM294v2 Gorilla (gorGor4) https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/gorGor4.json gorGor4 Gorilla (gorGor6) https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/gorGor6.json gorGor6 Bonobo (MPI-EVA panpan1.1/panPan2) https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/panPan2.json panPan2 Pig (SGSC Sscrofa11.1/susScr11) https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/susScr11.json susScr11 S. purpuratus (Baylor 2.1/strPur2) https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/strPur2.json strPur2 S. purpuratus (Spur5.0) https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/Spur5.0.json Spur5.0 P. miniata (Pmin3.0) https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/Pmin3.0.json Pmin3.0 L. variegatus (Lvar3.0) https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/Lvar3.0.json Lvar3.0 O. sativa IRGSP-1.0 (GCF_001433935.1) https://raw.githubusercontent.com/igvteam/igv-genomes/refs/heads/main/legacy/json/GCF_001433935.1.json GCF_001433935.1 E. coli K-12 (NC_000913.3) https://s3.amazonaws.com/igv.broadinstitute.org/genomes/NC_000913.3.gbk NC_000913.3 Francisella tularensis (NC_008601) https://s3.amazonaws.com/igv.broadinstitute.org/genomes/NC_008601.gbk NC_008601 Human Mito (NC_012920) https://s3.amazonaws.com/igv.broadinstitute.org/genomes/NC_012920.1.gbk NC_012920