This example illustrates embedding copy number segments directly as objects in lieu of supplying a url.
Tracks configuration:
tracks:
[
{
name: "Copy number",
type: "seg",
displayMode: "EXPANDED",
features: [
{
"chr": "1",
"start": 3218610,
"end": 4749076,
"value": -0.2239,
"sample": "TCGA-OR-A5J2-01"
},
{
"chr": "1",
"start": 4750119,
"end": 11347492,
"value": -0.8391,
"sample": "TCGA-OR-A5J2-01"
}
]
},
{
name: "Annotations",
type: "annotation",
displayMode: "EXPANDED",
features: [
{
"chr": "1",
"start": 3218610,
"end": 4749076,
"value": -0.2239,
"color": "blue",
"name": "Blue"
},
{
"chr": "1",
"start": 4750119,
"end": 11347492,
"value": -0.8391,
"color": "green",
"name": "Green"
}
]
},
{
name: "Wig",
type: "wig",
displayMode: "EXPANDED",
features: [
{
"chr": "1",
"start": 3218610,
"end": 4749076,
"value": -0.2239
},
{
"chr": "1",
"start": 4750119,
"end": 11347492,
"value": -0.8391
}
]
},
]